PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054280.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 154aa    MW: 17516.5 Da    PI: 10.3801
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054280.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.75.7e-1036121274
                   EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTH.HHHHHHHT- CS
            B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg.rsWevkliyrkksgryvltkGW.keFvkangL 74 
                   +k+l++sd + ++rl + ++f+++h           +++  ++ ++t++d +   + ++ + ++ +sg+yvl++GW keFvk  gL
  EcC054280.10  36 KKKLKQSDLGHLSRLLIGRDFVTSHllrwmseemvrQIEGGKGADVTVRDVDTcSEHRLVFVFWASSGSYVLRGGWiKEFVKRRGL 121
                   699**************************9998888444447889*****8887777888888*************889***9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.53E-1134123IPR015300DNA-binding pseudobarrel domain
CDDcd100172.63E-1035122No hitNo description
Gene3DG3DSA:2.40.330.102.2E-1136123IPR015300DNA-binding pseudobarrel domain
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
AAKYKRTRKG KGEDSGCDTE GVSTELVLLL DPYKIKKKLK QSDLGHLSRL LIGRDFVTSH  60
LLRWMSEEMV RQIEGGKGAD VTVRDVDTCS EHRLVFVFWA SSGSYVLRGG WIKEFVKRRG  120
LVMAMRSGYV GILVLASFTL AFFIRRIRFD LELV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010059748.19e-80PREDICTED: putative B3 domain-containing protein At1g78640
TrEMBLA0A059CBK61e-79A0A059CBK6_EUCGR; Uncharacterized protein
STRINGPOPTR_0003s19110.14e-25(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM456952
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.15e-18B3 family protein